SETX, chr9:135136743-135230372 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3739915 chr9:135277129 TTF1 All: C 7,520 8 T vs. G 0.05 (A) 0.217 (A) <1 (-) 0 (-) >0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3739915 chr9:135277129 TTF1 All: C 7,520 8 T vs. G 0.05 (A) 0.217 (A) <1 (-) 0 (-) >0.05
rs484932 chr9:135241587 TTF1 [-9421bp] All: C 7,520 8 A vs. C 0.042 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs3739916 chr9:135277006 TTF1 All: C 7,520 8 A vs. G 0.075 (T) - <1 (-) 0 (-) >0.05
rs554118 chr9:135271535 TTF1 All: C 7,520 8 C vs. T 0.175 (C) 0.467 (T) <1 (-) 0 (-) >0.05
rs1183768 chr9:135203230 SETX All: C 7,520 8 C vs. T 0.133 (C) 0.325 (T) >1 (-) 0 (-) >0.05
rs543573 chr9:135202828 SETX All: C 7,520 8 T vs. C 0.133 (T) 0.325 (C) >1 (-) 0 (-) >0.05
rs573913 chr9:135210323 SETX All: C 7,520 8 A vs. C 0.108 (A) 0.35 (C) >1 (-) 24 (-) >0.05
rs997784 chr9:135137363 SETX All: C 7,520 8 C vs. T 0.075 (C) 0.067 (C) >1 (-) 9 (-) >0.05
rs501377 chr9:135216185 SETX All: C 7,520 8 G vs. A 0.133 (G) 0.317 (A) >1 (-) 0 (-) >0.05
rs4962060 chr9:135126457 NTNG2 [+6536bp] All: C 7,520 8 C vs. T 0.383 (C) 0.383 (T) >1 (-) 0 (-) >0.05
rs1056899 chr9:135139900 SETX All: C 7,520 8 G vs. A 0.267 (C) 0.283 (T) >1 (-) 0 (-) >0.05
rs4962061 chr9:135132080 SETX [-4663bp] All: C 7,520 8 T vs. C 0.217 (T) 0.475 (T) <1 (-) 0 (-) >0.05
rs11243704 chr9:135153667 SETX All: C 7,520 8 T vs. C 0.258 (T) 0.325 (C) >1 (-) 0 (-) >0.05
rs508322 chr9:135226279 SETX All: C 7,520 8 T vs. C 0.25 (T) 0.483 (C) <1 (-) 0 (-) >0.05
rs8999 chr9:135277340 TTF1 All: C 7,520 8 T vs. G 0.067 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs2149171 chr9:135102253 NTNG2 All: C 7,520 8 C vs. T 0.442 (C) 0.4 (T) >1 (-) 28 (-) >0.05
rs492082 chr9:135227580 SETX All: C 7,520 8 T vs. C 0.125 (T) 0.492 (T) <1 (-) 0 (-) >0.05
rs914420 chr9:135104785 NTNG2 All: C 7,520 8 A vs. G 0.192 (T) 0.417 (T) <1 (-) 25 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.