ATXN2, chr12:111890018-112037480 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2301621 chr12:111895272 ATXN2 All: M, C 7,744 9 T vs. C 0.183 (T) 0.333 (T) 1.09 (1.01-1.18) 0 (0-6) 0.034
Meta_image?name=rs2301621

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2301621 chr12:111895272 ATXN2 All: M, C 7,744 9 T vs. C 0.183 (T) 0.333 (T) 1.09 (1.01-1.18) 0 (0-6) 0.034
rs607316 chr12:111969447 ATXN2 All: C 7,520 8 A vs. G 0.158 (T) 0.333 (T) >1 (-) 0 (-) >0.05
rs2239196 chr12:111873166 SH2B3 All: C 7,520 8 T vs. C 0.075 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs3184504 chr12:111884608 SH2B3 All: M, C 7,745 9 T vs. C 0.45 (T) 0.0 (T) 0.96 (0.90-1.02) 0 (0-48) 0.207
rs1544396 chr12:112062875 BRAP [-17075bp] All: M, C 7,745 9 C vs. T 0.208 (C) 0.125 (T) 1.05 (0.97-1.15) 0 (0-9) 0.215
rs2239194 chr12:111883779 SH2B3 All: M, C 7,746 9 T vs. C 0.083 (T) 0.317 (T) 1.07 (0.95-1.20) 0 (0-62) 0.287
rs653178 chr12:112007756 ATXN2 All: C 7,520 8 C vs. T 0.417 (C) 0.0 (C) 1.02 (0.96-1.09) 0 (0-67) 0.567

Association studies for this region [+]